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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915002.1_cds_XP_016464913.1_57911
CDS Infomation

[gene=LOC107787821] [db_xref=GeneID:107787821] [protein=protein transport protein Sec24-like CEF] [protein_id=XP_016464913.1] [location=complement(join(84406..84512,84963..84994,85168..85256,86540..86719,86871..87016,90402..90566,91545..91683,92139..92216,93302..93370,93487..93606,93777..93860,93979..94050,95133..95209,96382..96436,97144..97236,97352..97429,98380..98460,98540..98593))] [gbkey=CDS]
Sequence

ATGGAAGTTAGTGATCATGATACTCTGCTATTTGAGCTATCTTGCACTATTATGGAAGGT
CCTCGAACATTGGTTGGGATTGCTACATTTGACTCGACTATCCATTTTTACAATCTAAAA
CGAGCACTGCAGCAGCCATTGATGCTTATCGTCCCTGATGTCCAAGATGTTTACACTCCC
CTTCAGAGCGATGTTATTGTGCAACTCTCAGAGTGTCGTCAACATCTAGAGCTTCTCCTA
GAAAACATCCCAACATTGTTCGAACATAACAGGACTGCTGATTCAGCTTTTGGTGCTGCA
GTCAAGGCTTCTTTCTTGGCAATGAAACGCACCGGAGGGAAACTACTTGTATTTCAATCA
GTCTTGCCTTCTACCGGTATTGGAGCCCTTTCTGCTAGAGAGGCTGAAGGAAGAAGCAAC
ATATCAGCTGCTGAAAAGGAGGCTCATAAATTACTCCAACCGGCAGACAAAACCTTGAAG
ACTATGGCTGTCGAGTTTGCTGAGTATCAGGTCTGTGTTGATTTGTTTCTTACAACACAA
TCATATGTAGACATTGCCTCCATATGCGTCTTTCCTAGAACTACTGGAGGGCAGGTGTAC
TACTATTTCCCTTTCTCTGCTATTGCTGATACTGCCAAGCTCTACAATGATCTTCGATGG
AACATTACTAGGCCCCAAGGGTTTGAGGCTGTAATGCGTGTAAGATGCAGTCAGGGTCTT
CAAGTTCACGAATACTCTGGAAATTATTCTAGACGAATTCCAACAGATGTTGATCTACCT
GTGATTGACTGTGACAAAACTATAATGGTAACATTAAAGCATGATGACAAATTGCAGGAT
GGTTCTGAATGTTCTTTTCAGTGTGCTCTCCTTTACACCACCATCTATGGCCAAAGAAGA
ATCAGGGTTTCTACTTTATCTCTGCCTTGCACCACTGTGTTGGATAATCTGTTTCTATCA
GCTGACTTGGATACCCAATTTACTTGCATCTTGAAGCAAGTGGCCAGTGAAGTTCCAACA
GCTCCTCTTCCACAAATCCGAGAGCATGTGACAAACCATTGCATCAACATTCTACACTCT
TATCGTAAAATTTGTGCCACTGTCTCTTCCTCATCACAGCTTGTTCTTCCTGAGGCACTT
AAAATTCTTCCTCTTTACACACTAGCTCTGGTTAAAAGCCCTGGATTGCGAACTGATGGA
CTGATTGATAATAGGTCCTTCTGGATTAATTATGTTTCCCCACTGTCTGTTCCATTGGCT
ATCCCTTGGGTACACCCTAGATTGATAGCCATTCATGAATACAATATAGAGGAGGGTGAG
GAATCTATTATTCCTCCTCCTATTCCACTTTCCAGTGAACAGATTAGTGACAACAGTATC
TATCTTCTGGAGAACGGCGAGGACTGTTTAATTTATGTTGGAAACTCTGCAGATCCTGGT
GTTATGCGTCAACTTCTGGGCATTTCATCTGTTGAAGAAGTTCTTGCACAGTTTGTTCTG
CAGCAGTATGACAATCCACTCTCTAAGAAGCTCAATGATATCATTAATGATATTAGAAGC
CAAAGGTGTAACTACCTCCGCTTAAAAATATGCAGAAAAGGAGATTCATCAGGTATGTTG
TTTTTCTCCAACATGGTAGAAGACAAGACATCGCTTGGGCTTGCGTATGTCGACTTTCTG
GTACATATCCATGGGCAAATTAATAGCAAAATGGCATGA

Peptide Sequence

PEP ID

XP_016464913.1
PEP Infomation

PREDICTED: protein transport protein Sec24-like CEF [Nicotiana tabacum]
Sequence

MEVSDHDTLLFELSCTIMEGPRTLVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTP
LQSDVIVQLSECRQHLELLLENIPTLFEHNRTADSAFGAAVKASFLAMKRTGGKLLVFQS
VLPSTGIGALSAREAEGRSNISAAEKEAHKLLQPADKTLKTMAVEFAEYQVCVDLFLTTQ
SYVDIASICVFPRTTGGQVYYYFPFSAIADTAKLYNDLRWNITRPQGFEAVMRVRCSQGL
QVHEYSGNYSRRIPTDVDLPVIDCDKTIMVTLKHDDKLQDGSECSFQCALLYTTIYGQRR
IRVSTLSLPCTTVLDNLFLSADLDTQFTCILKQVASEVPTAPLPQIREHVTNHCINILHS
YRKICATVSSSSQLVLPEALKILPLYTLALVKSPGLRTDGLIDNRSFWINYVSPLSVPLA
IPWVHPRLIAIHEYNIEEGEESIIPPPIPLSSEQISDNSIYLLENGEDCLIYVGNSADPG
VMRQLLGISSVEEVLAQFVLQQYDNPLSKKLNDIINDIRSQRCNYLRLKICRKGDSSGML
FFSNMVEDKTSLGLAYVDFLVHIHGQINSKMA

Transcript Sequence

Gene sequence data has not been registered.